Accèder directement au contenu

Publications

2015

Methyl-CpG Binding Protein 2 (Mecp2) Regulates Sensory Function Through Sema5b and Robo2.
Leong WY, Lim ZH, Korzh V, Pietri T, Goh EL
Front Cell Neurosci. 2015. 9:481.

Bidirectional Control of Synaptic GABAAR Clustering by Glutamate and Calcium.
Bannai H, Niwa F, Sherwood MW, Shrivastava AN, Arizono M, Miyamoto A, Sugiura K, Lévi S, Triller A, Mikoshiba K
Cell Rep. 2015 Dec 29. 13(12):2768-80.

Quasi-planktonic behavior of foraging top marine predators.
Della Penna A, De Monte S, Kestenare E, Guinet C, d’Ovidio F
Sci Rep. 2015 Dec 15. 5:18063.

Impaired PRC2 activity promotes transcriptional instability and favors breast tumorigenesis.
Wassef M, Rodilla V, Teissandier A, Zeitouni B, Gruel N, Sadacca B, Irondelle M, Charruel M, Ducos B, Michaud A, Caron M, Marangoni E, Chavrier P, Le Tourneau C, Kamal M, Pasmant E, Vidaud M, Servant N, Reyal F, Meseure D, Vincent‑Salomon A, Fre S, Margueron R
Genes Dev. 2015 Dec 15. 29(24):2547-62.

The evolution of adhesiveness as a social adaptation.
Garcia T, Doulcier G, De Monte S
Elife. 2015 Nov 27. 4.

Presynaptic NMDA receptors : Roles and rules.
Bouvier G, Bidoret C, Casado M, Paoletti P
Neuroscience. 2015 Dec 17. 311:322-40.

Central role for ferritin in the day/night regulation of iron homeostasis in marine phytoplankton.
Botebol H, Lesuisse E, Šuták R, Six C, Lozano JC, Schatt P, Vergé V, Kirilovsky A, Morrissey J, Léger T, Camadro JM, Gueneugues A, Bowler C, Blain S, Bouget FY
Proc Natl Acad Sci U S A. 2015 Nov 24. 112(47):14652-7.

Predictive Spatiotemporal Manipulation of Signaling Perturbations Using Optogenetics.
Valon L, Etoc F, Remorino A, di Pietro F, Morin X, Dahan M, Coppey M
Biophys J. 2015 Nov 3. 109(9):1785-97.

Analysis and Interpretation of Superresolution Single-Particle Trajectories.
Holcman D, Hoze N, Schuss Z
Biophys J. 2015 Nov 3. 109(9):1761-71.

Plants Release Precursors of Histone Deacetylase Inhibitors to Suppress Growth of Competitors.
Venturelli S, Belz RG, Kämper A, Berger A, von Horn K, Wegner A, Böcker A, Zabulon G, Langenecker T, Kohlbacher O, Barneche F, Weigel D, Lauer UM, Bitzer M, Becker C
Plant Cell. 2015 Nov. 27(11):3175-89.

Why so many sperm cells ?
Reynaud K, Schuss Z, Rouach N, Holcman D
Commun Integr Biol. 2015 May-Jun. 8(3):e1017156.

Self-assembly and plasticity of synaptic domains through a reaction-diffusion mechanism.
Haselwandter CA, Kardar M, Triller A, da Silveira RA
Phys Rev E Stat Nonlin Soft Matter Phys. 2015 Sep. 92(3):032705.

The new nanophysiology : regulation of ionic flow in neuronal subcompartments.
Holcman D, Yuste R
Nat Rev Neurosci. 2015 Nov. 16(11):685-92.

Workshop report : Caenorhabditis nematodes as model organisms to study trait variation and its evolution.
Braendle C, Teotonio H
Worm. 2015 Apr-Jun. 4(2):e1021109.

FRET-Based Nanobiosensors for Imaging Intracellular Ca²⁺ and H⁺ Microdomains.
Zamaleeva AI, Despras G, Luccardini C, Collot M, de Waard M, Oheim M, Mallet JM, Feltz A
Sensors (Basel). 2015 Sep 23. 15(9):24662-80.

Ultrastructure and Membrane Traffic During Cell Division in the Marine Pennate Diatom Phaeodactylum tricornutum.
Tanaka A, De Martino A, Amato A, Montsant A, Mathieu B, Rostaing P, Tirichine L, Bowler C
Protist. 2015 Nov. 166(5):506-21.

How rods respond to single photons : Key adaptations of a G-protein cascade that enable vision at the physical limit of perception.
Reingruber J, Holcman D, Fain GL
Bioessays. 2015 Nov. 37(11):1243-52.

α-synuclein assemblies sequester neuronal α3-Na+/K+-ATPase and impair Na+ gradient.
Shrivastava AN, Redeker V, Fritz N, Pieri L, Almeida LG, Spolidoro M, Liebmann T, Bousset L, Renner M, Léna C, Aperia A, Melki R, Triller A
EMBO J. 2015 Oct 1. 34(19):2408-23.

Analysis of Single Locus Trajectories for Extracting In Vivo Chromatin Tethering Interactions.
Amitai A, Toulouze M, Dubrana K, Holcman D
PLoS Comput Biol. 2015 Aug. 11(8):e1004433.

Discovery of Drug Synergies in Gastric Cancer Cells Predicted by Logical Modeling.
Flobak Å, Baudot A, Remy E, Thommesen L, Thieffry D, Kuiper M, Lægreid A
PLoS Comput Biol. 2015 Aug. 11(8):e1004426.

Synaptic dynamics and neuronal network connectivity are reflected in the distribution of times in Up states.
Dao Duc K, Parutto P, Chen X, Epsztein J, Konnerth A, Holcman D
Front Comput Neurosci. 2015. 9:96.

Syncytial apoptosis signaling network induced by the HIV-1 envelope glycoprotein complex : an overview.
Nardacci R, Perfettini JL, Grieco L, Thieffry D, Kroemer G, Piacentini M
Cell Death Dis. 2015 Aug 6. 6:e1846.

Are the SSB-Interacting Proteins RecO, RecG, PriA and the DnaB-Interacting Protein Rep Bound to Progressing Replication Forks in Escherichia coli ?
Bentchikou E, Chagneau C, Long E, Matelot M, Allemand JF, Michel B
PLoS One. 2015. 10(8):e0134892.

Neuronal and microglial regulators of cortical wiring : usual and novel guideposts.
Squarzoni P, Thion MS, Garel S
Front Neurosci. 2015. 9:248.

C/EBPα Activates Pre-existing and De Novo Macrophage Enhancers during Induced Pre-B Cell Transdifferentiation and Myelopoiesis.
van Oevelen C, Collombet S, Vicent G, Hoogenkamp M, Lepoivre C, Badeaux A, Bussmann L, Sardina JL, Thieffry D, Beato M, Shi Y, Bonifer C, Graf T
Stem Cell Reports. 2015 Aug 11. 5(2):232-47.

Chimeric EWSR1-FLI1 regulates the Ewing sarcoma susceptibility gene EGR2 via a GGAA microsatellite.
Grünewald TG, Bernard V, Gilardi‑Hebenstreit P, Raynal V, Surdez D, Aynaud MM, Mirabeau O, Cidre‑Aranaz F, Tirode F, Zaidi S, Perot G, Jonker AH, Lucchesi C, Le Deley MC, Oberlin O, Marec‑Bérard P, Véron AS, Reynaud S, Lapouble E, Boeva V, Rio Frio T, Alonso J, Bhatia S, Pierron G, Cancel‑Tassin G, Cussenot O, Cox DG, Morton LM, Machiela MJ, Chanock SJ, Charnay P, Delattre O
Nat Genet. 2015 Sep. 47(9):1073-8.

Combined transcriptome studies identify AFF3 as a mediator of the oncogenic effects of β-catenin in adrenocortical carcinoma.
Lefèvre L, Omeiri H, Drougat L, Hantel C, Giraud M, Val P, Rodriguez S, Perlemoine K, Blugeon C, Beuschlein F, de Reyniès A, Rizk‑Rabin M, Bertherat J, Ragazzon B
Oncogenesis. 2015 Jul 27. 4:e161.

Boundary Caps Give Rise to Neurogenic Stem Cells and Terminal Glia in the Skin.
Gresset A, Coulpier F, Gerschenfeld G, Jourdon A, Matesic G, Richard L, Vallat JM, Charnay P, Topilko P
Stem Cell Reports. 2015 Aug 11. 5(2):278-90.

Marine microbial biodiversity, bioinformatics and biotechnology (M2B3) data reporting and service standards.
Ten Hoopen P, Pesant S, Kottmann R, Kopf A, Bicak M, Claus S, Deneudt K, Borremans C, Thijsse P, Dekeyzer S, Schaap DM, Bowler C, Glöckner FO, Cochrane G
Stand Genomic Sci. 2015. 10:20.

Multilayer and interconnected post-transcriptional and co-transcriptional control of plant NLRs.
Halter T, Navarro L
Curr Opin Plant Biol. 2015 Aug. 26:127-34.

Robust network oscillations during mammalian respiratory rhythm generation driven by synaptic dynamics.
Guerrier C, Hayes JA, Fortin G, Holcman D
Proc Natl Acad Sci U S A. 2015 Aug 4. 112(31):9728-33.

A microfluidic device to study neuronal and motor responses to acute chemical stimuli in zebrafish.
Candelier R, Murmu MS, Romano SA, Jouary A, Debrégeas G, Sumbre G
Sci Rep. 2015 Jul 21. 5:12196.

Atlas of Cancer Signalling Network : a systems biology resource for integrative analysis of cancer data with Google Maps.
Kuperstein I, Bonnet E, Nguyen HA, Cohen D, Viara E, Grieco L, Fourquet S, Calzone L, Russo C, Kondratova M, Dutreix M, Barillot E, Zinovyev A
Oncogenesis. 2015 Jul 20. 4:e160.

Pervasive robustness in biological systems.
Félix MA, Barkoulas M
Nat Rev Genet. 2015 Aug. 16(8):483-96.

Chromerid genomes reveal the evolutionary path from photosynthetic algae to obligate intracellular parasites.
Woo YH, Ansari H, Otto TD, Klinger CM, Kolisko M, Michálek J, Saxena A, Shanmugam D, Tayyrov A, Veluchamy A, Ali S, Bernal A, del Campo J, Cihlář J, Flegontov P, Gornik SG, Hajdušková E, Horák A, Janouškovec J, Katris NJ, Mast FD, Miranda‑Saavedra D, Mourier T, Naeem R, Nair M, Panigrahi AK, Rawlings ND, Padron‑Regalado E, Ramaprasad A, Samad N, Tomčala A, Wilkes J, Neafsey DE, Doerig C, Bowler C, Keeling PJ, Roos DS, Dacks JB, Templeton TJ, Waller RF, Lukeš J, Oborník M, Pain A
Elife. 2015 Jul 15. 4:e06974.

Energetic coupling between plastids and mitochondria drives CO2 assimilation in diatoms.
Bailleul B, Berne N, Murik O, Petroutsos D, Prihoda J, Tanaka A, Villanova V, Bligny R, Flori S, Falconet D, Krieger‑Liszkay A, Santabarbara S, Rappaport F, Joliot P, Tirichine L, Falkowski PG, Cardol P, Bowler C, Finazzi G
Nature. 2015 Aug 20. 524(7565):366-9.

Probing the target search of DNA-binding proteins in mammalian cells using TetR as model searcher.
Normanno D, Boudarène L, Dugast‑Darzacq C, Chen J, Richter C, Proux F, Bénichou O, Voituriez R, Darzacq X, Dahan M
Nat Commun. 2015 Jul 7. 6:7357.

Human Upf1 is a highly processive RNA helicase and translocase with RNP remodelling activities.
Fiorini F, Bagchi D, Le Hir H, Croquette V
Nat Commun. 2015 Jul 3. 6:7581.

Route to genetically targeted optical electrophysiology : development and applications of voltage-sensitive fluorescent proteins.
Akemann W, Song C, Mutoh H, Knöpfel T
Neurophotonics. 2015 Apr-Jun. 2(2).

Open science resources for the discovery and analysis of Tara Oceans data.
Pesant S, Not F, Picheral M, Kandels‑Lewis S, Le Bescot N, Gorsky G, Iudicone D, Karsenti E, Speich S, Troublé R, Dimier C, Searson S
Sci Data. 2015. 2:150023.

Bursting reverberation as a multiscale neuronal network process driven by synaptic depression-facilitation.
Dao Duc K, Lee CY, Parutto P, Cohen D, Segal M, Rouach N, Holcman D
PLoS One. 2015. 10(5):e0124694.

Ocean plankton. Determinants of community structure in the global plankton interactome.
Lima‑Mendez G, Faust K, Henry N, Decelle J, Colin S, Carcillo F, Chaffron S, Ignacio‑Espinosa JC, Roux S, Vincent F, Bittner L, Darzi Y, Wang J, Audic S, Berline L, Bontempi G, Cabello AM, Coppola L, Cornejo‑Castillo FM, d’Ovidio F, De Meester L, Ferrera I, Garet‑Delmas MJ, Guidi L, Lara E, Pesant S, Royo‑Llonch M, Salazar G, Sánchez P, Sebastian M, Souffreau C, Dimier C, Picheral M, Searson S, Kandels‑Lewis S, Gorsky G, Not F, Ogata H, Speich S, Stemmann L, Weissenbach J, Wincker P, Acinas SG, Sunagawa S, Bork P, Sullivan MB, Karsenti E, Bowler C, de Vargas C, Raes J
Science. 2015 May 22. 348(6237):1262073.

Ocean plankton. Eukaryotic plankton diversity in the sunlit ocean.
de Vargas C, Audic S, Henry N, Decelle J, Mahé F, Logares R, Lara E, Berney C, Le Bescot N, Probert I, Carmichael M, Poulain J, Romac S, Colin S, Aury JM, Bittner L, Chaffron S, Dunthorn M, Engelen S, Flegontova O, Guidi L, Horák A, Jaillon O, Lima‑Mendez G, Lukeš J, Malviya S, Morard R, Mulot M, Scalco E, Siano R, Vincent F, Zingone A, Dimier C, Picheral M, Searson S, Kandels‑Lewis S, Acinas SG, Bork P, Bowler C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Not F, Ogata H, Pesant S, Raes J, Sieracki ME, Speich S, Stemmann L, Sunagawa S, Weissenbach J, Wincker P, Karsenti E
Science. 2015 May 22. 348(6237):1261605.

Ocean plankton. Patterns and ecological drivers of ocean viral communities.
Brum JR, Ignacio‑Espinoza JC, Roux S, Doulcier G, Acinas SG, Alberti A, Chaffron S, Cruaud C, de Vargas C, Gasol JM, Gorsky G, Gregory AC, Guidi L, Hingamp P, Iudicone D, Not F, Ogata H, Pesant S, Poulos BT, Schwenck SM, Speich S, Dimier C, Kandels‑Lewis S, Picheral M, Searson S, Bork P, Bowler C, Sunagawa S, Wincker P, Karsenti E, Sullivan MB
Science. 2015 May 22. 348(6237):1261498.

Ocean plankton. Environmental characteristics of Agulhas rings affect interocean plankton transport.
Villar E, Farrant GK, Follows M, Garczarek L, Speich S, Audic S, Bittner L, Blanke B, Brum JR, Brunet C, Casotti R, Chase A, Dolan JR, d’Ortenzio F, Gattuso JP, Grima N, Guidi L, Hill CN, Jahn O, Jamet JL, Le Goff H, Lepoivre C, Malviya S, Pelletier E, Romagnan JB, Roux S, Santini S, Scalco E, Schwenck SM, Tanaka A, Testor P, Vannier T, Vincent F, Zingone A, Dimier C, Picheral M, Searson S, Kandels‑Lewis S, Acinas SG, Bork P, Boss E, de Vargas C, Gorsky G, Ogata H, Pesant S, Sullivan MB, Sunagawa S, Wincker P, Karsenti E, Bowler C, Not F, Hingamp P, Iudicone D
Science. 2015 May 22. 348(6237):1261447.

Ocean plankton. Structure and function of the global ocean microbiome.
Sunagawa S, Coelho LP, Chaffron S, Kultima JR, Labadie K, Salazar G, Djahanschiri B, Zeller G, Mende DR, Alberti A, Cornejo‑Castillo FM, Costea PI, Cruaud C, d’Ovidio F, Engelen S, Ferrera I, Gasol JM, Guidi L, Hildebrand F, Kokoszka F, Lepoivre C, Lima‑Mendez G, Poulain J, Poulos BT, Royo‑Llonch M, Sarmento H, Vieira‑Silva S, Dimier C, Picheral M, Searson S, Kandels‑Lewis S, Bowler C, de Vargas C, Gorsky G, Grimsley N, Hingamp P, Iudicone D, Jaillon O, Not F, Ogata H, Pesant S, Speich S, Stemmann L, Sullivan MB, Weissenbach J, Wincker P, Karsenti E, Raes J, Acinas SG, Bork P
Science. 2015 May 22. 348(6237):1261359.

Tara Oceans. Tara Oceans studies plankton at planetary scale. Introduction.
Bork P, Bowler C, de Vargas C, Gorsky G, Karsenti E, Wincker P
Science. 2015 May 22. 348(6237):873.

Computational eco-systems biology in Tara Oceans : translating data into knowledge.
Sunagawa S, Karsenti E, Bowler C, Bork P
Mol Syst Biol. 2015 May 21. 11(5):809.

A new approach to the generation time in matrix population models.
Bienvenu F, Legendre S
Am Nat. 2015 Jun. 185(6):834-43.

An integrative analysis of post-translational histone modifications in the marine diatom Phaeodactylum tricornutum.
Veluchamy A, Rastogi A, Lin X, Lombard B, Murik O, Thomas Y, Dingli F, Rivarola M, Ott S, Liu X, Sun Y, Rabinowicz PD, McCarthy J, Allen AE, Loew D, Bowler C, Tirichine L
Genome Biol. 2015 May 20. 16:102.

Partner choice creates fairness in humans.
Debove S, André JB, Baumard N
Proc Biol Sci. 2015 Jun 7. 282(1808):20150392.

A novel inhibitory nucleo-cortical circuit controls cerebellar Golgi cell activity.
Ankri L, Husson Z, Pietrajtis K, Proville R, Léna C, Yarom Y, Dieudonné S, Uusisaari MY
Elife. 2015 May 12. 4.

Light signaling controls nuclear architecture reorganization during seedling establishment.
Bourbousse C, Mestiri I, Zabulon G, Bourge M, Formiggini F, Koini MA, Brown SC, Fransz P, Bowler C, Barneche F
Proc Natl Acad Sci U S A. 2015 May 26. 112(21):E2836-44.

Potentiel thérapeutique de la neuromodulation optogénétique.
Vandecasteele M, Senova YS, Palfi S, Dugué GP
Med Sci (Paris). 2015 Apr. 31(4):404-16.

Les approches écologiques et évolutives incontournables pour mieux comprendre les épidémies de grippe aviaire.
Cazelles B, Tian H, Roche B
Med Sci (Paris). 2015 Apr. 31(4):372-3.

Neuronal morphology generates high-frequency firing resonance.
Ostojic S, Szapiro G, Schwartz E, Barbour B, Brunel N, Hakim V
J Neurosci. 2015 May 6. 35(18):7056-68.

Zeb family members and boundary cap cells underlie developmental plasticity of sensory nociceptive neurons.
Ohayon D, Ventéo S, Sonrier C, Lafon PA, Garcès A, Valmier J, Rivat C, Topilko P, Carroll P, Pattyn A
Dev Cell. 2015 May 4. 33(3):343-50.

Control of brain patterning by Engrailed paracrine transfer : a new function of the Pbx interaction domain.
Rampon C, Gauron C, Lin T, Meda F, Dupont E, Cosson A, Ipendey E, Frerot A, Aujard I, Le Saux T, Bensimon D, Jullien L, Volovitch M, Vriz S, Joliot A
Development. 2015 May 15. 142(10):1840-9.

Out-of-focus background subtraction for fast structured illumination super-resolution microscopy of optically thick samples.
Vermeulen P, Zhan H, Orieux F, Olivo‑Marin JC, Lenkei Z, Loriette V, Fragola A
J Microsc. 2015 Sep. 259(3):257-68.

Long-range evolutionary constraints reveal cis-regulatory interactions on the human X chromosome.
Naville M, Ishibashi M, Ferg M, Bengani H, Rinkwitz S, Krecsmarik M, Hawkins TA, Wilson SW, Manning E, Chilamakuri CS, Wilson DI, Louis A, Lucy Raymond F, Rastegar S, Strähle U, Lenhard B, Bally‑Cuif L, van Heyningen V, FitzPatrick DR, Becker TS, Roest Crollius H
Nat Commun. 2015 Apr 24. 6:6904.

RSAT 2015 : Regulatory Sequence Analysis Tools.
Medina‑Rivera A, Defrance M, Sand O, Herrmann C, Castro‑Mondragon JA, Delerce J, Jaeger S, Blanchet C, Vincens P, Caron C, Staines DM, Contreras‑Moreira B, Artufel M, Charbonnier‑Khamvongsa L, Hernandez C, Thieffry D, Thomas‑Chollier M, van Helden J
Nucleic Acids Res. 2015 Jul 1. 43(W1):W50-6.

Inferring epigenetic dynamics from kin correlations.
Hormoz S, Desprat N, Shraiman BI
Proc Natl Acad Sci U S A. 2015 May 5. 112(18):E2281-9.

Genome-wide negative feedback drives transgenerational DNA methylation dynamics in Arabidopsis.
Ito T, Tarutani Y, To TK, Kassam M, Duvernois‑Berthet E, Cortijo S, Takashima K, Saze H, Toyoda A, Fujiyama A, Colot V, Kakutani T
PLoS Genet. 2015 Apr. 11(4):e1005154.

Radixin regulates synaptic GABAA receptor density and is essential for reversal learning and short-term memory.
Hausrat TJ, Muhia M, Gerrow K, Thomas P, Hirdes W, Tsukita S, Heisler FF, Herich L, Dubroqua S, Breiden P, Feldon J, Schwarz JR, Yee BK, Smart TG, Triller A, Kneussel M
Nat Commun. 2015 Apr 20. 6:6872.

Subrepellent doses of Slit1 promote Netrin-1 chemotactic responses in subsets of axons.
Dupin I, Lokmane L, Dahan M, Garel S, Studer V
Neural Dev. 2015 Mar 20. 10:5.

Functional characterization of the diatom cyclin-dependent kinase A2 as a mitotic regulator reveals plant-like properties in a non-green lineage.
Huysman MJ, Tanaka A, Bowler C, Vyverman W, De Veylder L
BMC Plant Biol. 2015 Mar 14. 15:86.

Origin and diversification of living cycads : a cautionary tale on the impact of the branching process prior in Bayesian molecular dating.
Condamine FL, Nagalingum NS, Marshall CR, Morlon H
BMC Evol Biol. 2015 Apr 17. 15:65.

Trophic groups and modules : two levels of group detection in food webs.
Gauzens B, Thébault E, Lacroix G, Legendre S
J R Soc Interface. 2015 May 6. 12(106).

The retrotrapezoid nucleus neurons expressing Atoh1 and Phox2b are essential for the respiratory response to CO₂.
Ruffault PL, D’Autréaux F, Hayes JA, Nomaksteinsky M, Autran S, Fujiyama T, Hoshino M, Hägglund M, Kiehn O, Brunet JF, Fortin G, Goridis C
Elife. 2015 Apr 13. 4.

Intermolecular recognition of the non-coding RNA 7SK and HEXIM protein in perspective.
Martinez‑Zapien D, Saliou JM, Han X, Atmanene C, Proux F, Cianférani S, Dock‑Bregeon AC
Biochimie. 2015 Oct. 117:63-71.

Principes et applications de l’optogénétique en neuroscience.
Dugué GP, Tricoire L
Med Sci (Paris). 2015 Mar. 31(3):291-303.

Amplification des centrioles - Quand le centriole fils du centrosome prend le contrôle.
Al Jord A, Spassky N, Meunier A
Med Sci (Paris). 2015 Mar. 31(3):250-3.

When everything is not everywhere but species evolve : an alternative method to model adaptive properties of marine ecosystems.
Sauterey B, Ward BA, Follows MJ, Bowler C, Claessen D
J Plankton Res. 2015 Jan. 37(1):28-47.

Ependymal cell differentiation, from monociliated to multiciliated cells.
Delgehyr N, Meunier A, Faucourt M, Bosch Grau M, Strehl L, Janke C, Spassky N
Methods Cell Biol. 2015. 127:19-35.

The neuroglial potassium cycle during neurotransmission : role of Kir4.1 channels.
Sibille J, Dao Duc K, Holcman D, Rouach N
PLoS Comput Biol. 2015 Mar. 11(3):e1004137.

CaRuby-Nano : a novel high affinity calcium probe for dual color imaging.
Collot M, Wilms CD, Bentkhayet A, Marcaggi P, Couchman K, Charpak S, Dieudonné S, Häusser M, Feltz A, Mallet JM
Elife. 2015 Mar 31. 4.

Changes in rodent abundance and weather conditions potentially drive hemorrhagic fever with renal syndrome outbreaks in Xi’an, China, 2005-2012.
Tian HY, Yu PB, Luis AD, Bi P, Cazelles B, Laine M, Huang SQ, Ma CF, Zhou S, Wei J, Li S, Lu XL, Qu JH, Dong JH, Tong SL, Wang JJ, Grenfell B, Xu B
PLoS Negl Trop Dis. 2015 Mar. 9(3):e0003530.

CLIP-seq to discover transcriptome-wide imprinting of RNA binding proteins in living cells.
Saulière J, Le Hir H
Methods Mol Biol. 2015. 1296:151-60.

Effect of dopaminergic D1 receptors on plasticity is dependent of serotoninergic 5-HT1A receptors in L5-pyramidal neurons of the prefrontal cortex.
Meunier CN, Callebert J, Cancela JM, Fossier P
PLoS One. 2015. 10(3):e0120286.

How Ecology and Landscape Dynamics Shape Phylogenetic Trees.
Gascuel F, Ferrière R, Aguilée R, Lambert A
Syst Biol. 2015 Jul. 64(4):590-607.

How environmental conditions impact mosquito ecology and Japanese encephalitis : an eco-epidemiological approach.
Tian HY, Bi P, Cazelles B, Zhou S, Huang SQ, Yang J, Pei Y, Wu XX, Fu SH, Tong SL, Wang HY, Xu B
Environ Int. 2015 Jun. 79:17-24.

Bistability in a metabolic network underpins the de novo evolution of colony switching in Pseudomonas fluorescens.
Gallie J, Libby E, Bertels F, Remigi P, Jendresen CB, Ferguson GC, Desprat N, Buffing MF, Sauer U, Beaumont HJ, Martinussen J, Kilstrup M, Rainey PB
PLoS Biol. 2015 Mar. 13(3):e1002109.

Immune quiescence of the brain is set by astroglial connexin 43.
Boulay AC, Mazeraud A, Cisternino S, Saubaméa B, Mailly P, Jourdren L, Blugeon C, Mignon V, Smirnova M, Cavallo A, Ezan P, Avé P, Dingli F, Loew D, Vieira P, Chrétien F, Cohen‑Salmon M
J Neurosci. 2015 Mar 11. 35(10):4427-39.

Structural insight into the mechanism of stabilization of the 7SK small nuclear RNA by LARP7.
Uchikawa E, Natchiar KS, Han X, Proux F, Roblin P, Zhang E, Durand A, Klaholz BP, Dock‑Bregeon AC
Nucleic Acids Res. 2015 Mar 31. 43(6):3373-88.

Properties and molecular identity of NMDA receptors at synaptic and non-synaptic inputs in cerebellar molecular layer interneurons.
Bidoret C, Bouvier G, Ayon A, Szapiro G, Casado M
Front Synaptic Neurosci. 2015. 7:1.

Control of Plasma Membrane Permeability by ABC Transporters.
Khakhina S, Johnson SS, Manoharlal R, Russo SB, Blugeon C, Lemoine S, Sunshine AB, Dunham MJ, Cowart LA, Devaux F, Moye‑Rowley WS
Eukaryot Cell. 2015 May. 14(5):442-53.

The Susd2 protein regulates neurite growth and excitatory synaptic density in hippocampal cultures.
Nadjar Y, Triller A, Bessereau JL, Dumoulin A
Mol Cell Neurosci. 2015 Mar. 65:82-91.

ChIP-exo signal associated with DNA-binding motifs provides insight into the genomic binding of the glucocorticoid receptor and cooperating transcription factors.
Starick SR, Ibn‑Salem J, Jurk M, Hernandez C, Love MI, Chung HR, Vingron M, Thomas‑Chollier M, Meijsing SH
Genome Res. 2015 Jun. 25(6):825-35.

Phylogenies support out-of-equilibrium models of biodiversity.
Manceau M, Lambert A, Morlon H
Ecol Lett. 2015 Apr. 18(4):347-56.

The TORC2 component, Sin1, controls migration of anterior mesendoderm during zebrafish gastrulation.
Dumortier JG, David NB
PLoS One. 2015. 10(2):e0118474.

A subcortical inhibitory signal for behavioral arrest in the thalamus.
Giber K, Diana MA, Plattner V, Dugué GP, Bokor H, Rousseau CV, Maglóczky Z, Havas L, Hangya B, Wildner H, Zeilhofer HU, Dieudonné S, Acsády L
Nat Neurosci. 2015 Apr. 18(4):562-568.

Spontaneous neuronal network dynamics reveal circuit’s functional adaptations for behavior.
Romano SA, Pietri T, Pérez‑Schuster V, Jouary A, Haudrechy M, Sumbre G
Neuron. 2015 Mar 4. 85(5):1070-85.

The Sarcoglycan complex is expressed in the cerebrovascular system and is specifically regulated by astroglial Cx30 channels.
Boulay AC, Saubaméa B, Cisternino S, Mignon V, Mazeraud A, Jourdren L, Blugeon C, Cohen‑Salmon M
Front Cell Neurosci. 2015. 9:9.

The shortest path is not the one you know : application of biological network resources in precision oncology research.
Kuperstein I, Grieco L, Cohen DP, Thieffry D, Zinovyev A, Barillot E
Mutagenesis. 2015 Mar. 30(2):191-204.

Contingency in the evolutionary emergence of reciprocal cooperation.
André JB
Am Nat. 2015 Mar. 185(3):303-16.

Epigenetic basis of morphological variation and phenotypic plasticity in Arabidopsis thaliana.
Kooke R, Johannes F, Wardenaar R, Becker F, Etcheverry M, Colot V, Vreugdenhil D, Keurentjes JJ
Plant Cell. 2015 Feb. 27(2):337-48.

Oil accumulation by the oleaginous diatom Fistulifera solaris as revealed by the genome and transcriptome.
Tanaka T, Maeda Y, Veluchamy A, Tanaka M, Abida H, Maréchal E, Bowler C, Muto M, Sunaga Y, Tanaka M, Yoshino T, Taniguchi T, Fukuda Y, Nemoto M, Matsumoto M, Wong PS, Aburatani S, Fujibuchi W
Plant Cell. 2015 Jan. 27(1):162-76.

Cooperative development of logical modelling standards and tools with CoLoMoTo.
Naldi A, Monteiro PT, Müssel C, Kestler HA, Thieffry D, Xenarios I, Saez‑Rodriguez J, Helikar T, Chaouiya C
Bioinformatics. 2015 Apr 1. 31(7):1154-9.

Editorial overview : neurosciences : targeting glutamatergic signaling in CNS diseases : new hopes ?
Paoletti P, Pin JP
Curr Opin Pharmacol. 2015 Feb. 20:iv-vi.

Peaks cloaked in the mist : the landscape of mammalian replication origins.
Hyrien O
J Cell Biol. 2015 Jan 19. 208(2):147-60.

Primary and secondary siRNA synthesis triggered by RNAs from food bacteria in the ciliate Paramecium tetraurelia.
Carradec Q, Götz U, Arnaiz O, Pouch J, Simon M, Meyer E, Marker S
Nucleic Acids Res. 2015 Feb 18. 43(3):1818-33.

A novel protein, ubiquitous in marine phytoplankton, concentrates iron at the cell surface and facilitates uptake.
Morrissey J, Sutak R, Paz‑Yepes J, Tanaka A, Moustafa A, Veluchamy A, Thomas Y, Botebol H, Bouget FY, McQuaid JB, Tirichine L, Allen AE, Lesuisse E, Bowler C
Curr Biol. 2015 Feb 2. 25(3):364-71.

A genomic region encompassing a newly identified exon provides enhancing activity sufficient for normal myo7aa expression in zebrafish sensory hair cells.
Ernest S, Rosa FM
Dev Neurobiol. 2015 Sep. 75(9):961-83.

PRC2 represses dedifferentiation of mature somatic cells in Arabidopsis.
Ikeuchi M, Iwase A, Rymen B, Harashima H, Shibata M, Ohnuma M, Breuer C, Morao AK, de Lucas M, De Veylder L, Goodrich J, Brady SM, Roudier F, Sugimoto K
Nat Plants. 2015 Jun 29. 1:15089.

Genome expansion of Arabis alpina linked with retrotransposition and reduced symmetric DNA methylation.
Willing EM, Rawat V, Mandáková T, Maumus F, James GV, Nordström KJ, Becker C, Warthmann N, Chica C, Szarzynska B, Zytnicki M, Albani MC, Kiefer C, Bergonzi S, Castaings L, Mateos JL, Berns MC, Bujdoso N, Piofczyk T, de Lorenzo L, Barrero‑Sicilia C, Mateos I, Piednoël M, Hagmann J, Chen‑Min‑Tao R, Iglesias‑Fernández R, Schuster SC, Alonso‑Blanco C, Roudier F, Carbonero P, Paz‑Ares J, Davis SJ, Pecinka A, Quesneville H, Colot V, Lysak MA, Weigel D, Coupland G, Schneeberger K
Nat Plants. 2015 Feb 2. 1:14023.

Stochastic dynamics of adaptive trait and neutral marker driven by eco-evolutionary feedbacks.
Billiard S, Ferrière R, Méléard S, Tran VC
J Math Biol. 2015 Nov. 71(5):1211-42.

Presence in Mediterranean hotspots and floral symmetry affect speciation and extinction rates in Proteaceae.
Reyes E, Morlon H, Sauquet H
New Phytol. 2015 Jul. 207(2):401-10.

Evolution of equal division among unequal partners.
Debove S, Baumard N, André JB
Evolution. 2015 Feb. 69(2):561-9.

Molecular dissection of segment formation in the developing hindbrain.
Labalette C, Wassef MA, Desmarquet‑Trin Dinh C, Bouchoucha YX, Le Men J, Charnay P, Gilardi‑Hebenstreit P
Development. 2015 Jan 1. 142(1):185-95.

Membrane glycerolipid remodeling triggered by nitrogen and phosphorus starvation in Phaeodactylum tricornutum.
Abida H, Dolch LJ, Meï C, Villanova V, Conte M, Block MA, Finazzi G, Bastien O, Tirichine L, Bowler C, Rébeillé F, Petroutsos D, Jouhet J, Maréchal E
Plant Physiol. 2015 Jan. 167(1):118-36.

Allosteric modulators of NMDA receptors : multiple sites and mechanisms.
Zhu S, Paoletti P
Curr Opin Pharmacol. 2015 Feb. 20:14-23.

GenomicusPlants : a web resource to study genome evolution in flowering plants.
Louis A, Murat F, Salse J, Crollius HR
Plant Cell Physiol. 2015 Jan. 56(1):e4.

Genomicus update 2015 : KaryoView and MatrixView provide a genome-wide perspective to multispecies comparative genomics.
Louis A, Nguyen NT, Muffato M, Roest Crollius H
Nucleic Acids Res. 2015 Jan. 43(Database issue):D682-9.

Synaptic receptor dynamics : from theoretical concepts to deep quantification and chemistry in cellulo.
Salvatico C, Specht CG, Triller A
Neuropharmacology. 2015 Jan. 88:2-9.

Kinetics of aggregation with a finite number of particles and application to viral capsid assembly.
Hoze N, Holcman D
J Math Biol. 2015 Jun. 70(7):1685-705.

Post-transcriptional regulation in the nucleus and cytoplasm : study of mean time to threshold (MTT) and narrow escape problem.
Holcman D, Dao Duc K, Jones A, Byrne H, Burrage K
J Math Biol. 2015 Mar. 70(4):805-28.

The 3D organization of chromatin explains evolutionary fragile genomic regions.
Berthelot C, Muffato M, Abecassis J, Roest Crollius H
Cell Rep. 2015 Mar 24. 10(11):1913-24.

Anhydrobiosis and freezing-tolerance : adaptations that facilitate the establishment of Panagrolaimus nematodes in polar habitats.
McGill LM, Shannon AJ, Pisani D, Félix MA, Ramløv H, Dix I, Wharton DA, Burnell AM
PLoS One. 2015. 10(3):e0116084.

C. elegans outside the Petri dish.
Frézal L, Félix MA
Elife. 2015 Mar 30. 4.

The ß-importin KAP8 (Pse1/Kap121) is required for nuclear import of the cellulase transcriptional regulator XYR1, asexual sporulation and stress resistance in Trichoderma reesei.
Ghassemi S, Lichius A, Bidard F, Lemoine S, Rossignol MN, Herold S, Seidl‑Seiboth V, Seiboth B, Espeso EA, Margeot A, Kubicek CP
Mol Microbiol. 2015 Apr. 96(2):405-18.

Fast spatial beam shaping by acousto-optic diffraction for 3D non-linear microscopy.
Akemann W, Léger JF, Ventalon C, Mathieu B, Dieudonné S, Bourdieu L
Opt Express. 2015 Nov 2. 23(22):28191-205.

Characterization of the angular memory effect of scattered light in biological tissues.
Schott S, Bertolotti J, Léger JF, Bourdieu L, Gigan S
Opt Express. 2015 May 18. 23(10):13505-16.