Accèder directement au contenu

Publications

BioRxiv

An RNA-binding protein secreted by Listeria monocytogenes activates RIG-I signaling
Pagliuso Alessandro, Tham To Nam, Allemand Eric, Robertin Stevens, Dupuy Bruno, Bertrand Quentin, Bécavin Christophe, Koutero Mikael, Najburg Valérie, Nahori Marie‑Anne, Stavru Fabrizia, Dessen Andréa, Muchard Christian, Lebreton Alice, Komarova Anastassia V, Cossart Pascale
BioRxiv.

From individuals to populations : How intraspecific competition shapes thermal reaction norms
Mallard François, Le Bourlot Vincent, Le Coeur Christie, Péronnet Romain, Avnaim Monique, Claessen David, Tully Thomas
BioRxiv.

Dynamics of centriole amplification in centrosome-depleted brain multiciliated progenitors
MERCEY Olivier, Al Jord Adel, Rostaing Philippe, Mahuzier Alexia, Fortoul Aurelien, Boudjema Amelie‑Rose, Faucourt Marion, Spassky Nathalie, Meunier Alice
BioRxiv.

Constraints upon cheating emergence in mutualistic networks : evidence in the mycorrhizal symbiosis
Perez‑Lamarque Benoit, Selosse Marc‑Andre, Opik Maarja, Morlon Helene, Martos Florent
BioRxiv.

Super-resolution Molecular Map of Basal Foot Reveals Novel Cilium in Airway Multiciliated Cells
Nguyen Quynh, Liu Zhen, Nanjundappa Rashmi, Megherbi Alexandre, Delgehyr Nathalie, Ouyang Hong, Zock Lorna, Coyaud Etienne, Laurent Estelle, Dell Sharon, Finkbeiner Walter, Moraes Theo, Raught Brian, Czymmek Kirk, Munier Alice, Mahjoub Moe R., Mennella Vito
BioRxiv.

Linker histones regulate fine-scale chromatin organization and modulate developmental decisions in Arabidopsis
Rutowicz Kinga, Lirski Maciej, Mermaz Benoit, Schubert Jasmin, Teano Gianluca, Mestiri Imen, Kroteń Magdalena A., Ndinyanka Fabrice Tohnyui, Fritz Simon, Grob Stefan, Ringli Christoph, Cherkezyan Lusik, Barneche Fredy, Jerzmanowski Andrzej, Baroux Celia
BioRxiv.

Glycerol phosphate acyltransferase 6 controls filamentous pathogen interactions and cell wall properties of the tomato and
Fawke Stuart, Torode Thomas A, Gogleva Anna, Fich Eric A, Sørensen Iben, Yunusov Temur, Rose Jocelyn KC, Schornack Sebastian
BioRxiv.

Why would parthenogenetic females systematically produce males who never transmit their genes to females ?
Grosmaire Manon, Launay Caroline, Siegwald Marion, Felix Marie‑Anne, Gouyon Pierre‑Henri, Delattre Marie
BioRxiv.

Transposon accumulation lines uncover histone H2A.Z-driven integration bias towards environmentally responsive genes
Quadrana Leandro, Etcheverry Mathilde, Gilly Arthur, Caillieux Erwann, Madoui Mohammed‑Amin, Guy Julie, Bortolini Silveira Amanda, Engelen Stefan, Baillet Victoire, Wincker Patrick, Aury Jean‑Marc, Colot Vincent
BioRxiv.

Fast two-photon volumetric imaging of an improved voltage indicator reveals electrical activity in deeply located neurons in the awake brain
Chavarha Mariya, Villette Vincent, Dimov Ivan, Pradhan Lagnajeet, Evans Stephen, Shi Dongqing, Yang Renzhi, Chamberland Simon, Bradley Jonathan, Mathieu Benjamin, St‑Pierre Francois, Schnitzer Mark J, Bi Guoqiang, Toth Katalin, Ding Jun, Dieudonne Stephane, Lin Michael
BioRxiv.

Asymmetric ephaptic inhibition between compartmentalized olfactory receptor neurons
Zhang Ye, Tsang Tin Ki, Bushong Eric A, Chu Li‑An, Chiang Ann‑Shyn, Ellisman Mark H, Reingruber Jürgen, Su Chih‑Ying
BioRxiv.

Mapping DNA replication with nanopore sequencing
Hennion Magali, Arbona Jean‑Michel, Cruaud Corinne, Proux Florence, Le Tallec Benoît, Novikova Elizaveta, Engelen Stéfan, Lemainque Arnaud, Audit Benjamin, Hyrien Olivier
BioRxiv.

Quantitative study of the somitogenetic wavefront in zebrafish
Zhang Weiting, Ducos Bertrand, Delagrange Marine, Vriz Sophie, Bensimon David
BioRxiv.

Transfer RNA Genes Affect Chromosome Structure and Function via Local Effects
Kamakaka Rohinton T, Hamdani Omar, Dhillon Namrita, Hsieh Tsung‑Han S, Fujita Takahiro, Ocampo Josefina, Kirkland Jacob G, Lawrimore Josh, Kobayashi Tetsuya J, Friedman Brandon, Fulton Derek, Wu Kenneth Y, Chereji R ?zvan V, Oki Masaya, Bloom Kerry S, Clark David, Rando Oliver J
BioRxiv.

Evolution of DNA methylation in
Vilgalys Tauras P, Rogers Jeffrey, Jolly Clifford, Mukherjee Sayan, Tung Jenny
BioRxiv.

An interaction network of the human SEPT9 established by quantitative mass spectrometry reveals an interplay with myosin motors
Hecht Matthias, Rösler Reinhild, Wiese Sebastian, Johnsson Nils, Gronemeyer Thomas
BioRxiv.

Necessity and contingency in developmental genetic screens : LIN-3, Wnt and semaphorin pathways in vulval induction of the nematode
Félix Marie‑Anne, Vargas Velazquez Amhed Missael, Besnard Fabrice
BioRxiv.

Active intermixing of indirect and direct neurons builds the striatal mosaic
Tinterri Andrea, Mendary Fabien, Diana Marco A, Lokmane Ludmilla, Keita Maryama, Coulpier Fanny, Lemoine Sophie, Mailhes Caroline, Mathieu Benjamin, Marchan‑Sala Paloma, Campbell Kenneth, Gyory Ildiko, Grosschedl Rudolf, Popa Daniela, Garel Sonia
BioRxiv.

GC content shapes mRNA decay and storage in human cells
Courel Maite, Clement Yves, Foretek Domenika, Vidal Olivia, Yi Zhou, Kress Michel, Vindry Caroline, Benard Marianne, Bossevain Clementine, Antoniewski Christophe, Morillon Antonin, Brest Patrick, Hubstenberger Arnaud, Roest Crollius Hugues, Standart Nancy, Weil Dominique
BioRxiv.

Mild drought induces phenotypic and DNA methylation plasticity but no transgenerational effects in Arabidopsis
Van Dooren Tom, Silveira Amanda, Gilbaut Elodie, Jimenez‑Gomez Jose M, Martin Antoine, Bach Lien, Tisne Sebastien, Quadrana Leandro, Loudet Olivier, Colot Vincent
BioRxiv.

Differential retention of transposable element-derived sequences in outcrossing Arabidopsis genomes
Legrand Sylvain, Caron Thibault, Maumus Florian, Schvartzman Sol, Quadrana Leandro, Durand Eleonore, Gallina Sophie, Pauwels Maxime, Mazoyer Clement, Huyghe Lucie, Colot Vincent, Hanikenne Marc, Castric Vincent
BioRxiv.

A potential role for epigenetic processes in the acclimation response to elevated pCO2 in the model diatom Phaeodactylum tricornutum
Huang Ruiping, Ding Jiancheng, Gao Kunshan, de Carvalho Maria Helena Cruz, Bowler Chris, Tirichine Leila, Lin Xin
BioRxiv.

Nuclear actin is required for transcription during Drosophila oogenesis
Sokolova Maria, Moore Henna M, Prajapati Bina, Dopie Joseph, Merilainen Leena, Honkanen Mikko, Cerejeira Matos Rita, Poukkula Minna, Hietakangas Ville, Vartiainen Maria
BioRxiv.

Active fluctuations modulate gene expression in mouse oocytes
Almonacid Maria, El‑Hayek Stephany, Othmani Alice, Queguiner Isabelle, Coulpier Fanny, Lemoine Sophie, Bastianelli Leïla, Klein Christophe, Piolot Tristan, Mailly Philippe, Voituriez Raphaël, Genovesio Auguste, Verlhac Marie‑Hélène
BioRxiv.

Cerebrovascular Injuries Induce Lymphatic Invasion into Brain Parenchyma to Guide Vascular Regeneration in Zebrafish
Chen Jingying, He Jianbo, Yang Qifen, Zhang Yaoguang, Luo Lingfei
BioRxiv.

Yeast PAF1 complex restricts the accumulation of RNA polymerase III and counters the replication stress on the transcribed genes
Bhalla Pratibha, Vernekar Dipti Vinayak, Shukla Ashutosh, Gilquin Benoit, Coute Yohnn, Bhargava Purnima
BioRxiv.

Cell adhesion promoted by a unique Shigella IpaA vinculin- and talin-binding site
Valencia‑Gallardo Cesar Margarito, Bou‑Nader Charles, Aguilar Daniel, Carayol Nathalie, Quenech’Du Nicole, Pecqueur Ludovic, Park HaJeung, Fontecave Marc, Izard Tina, Tran Van Nhieu Guy
BioRxiv.

Non-coding AUG circRNAs constitute an abundant and conserved subclass of circles
Stagsted Lotte Victoria Winther, Nielsen Katrine Mandrup, Daugaard Iben, Hansen Thomas Birkballe
BioRxiv.

Synthetic STARR-seq reveals how DNA shape and sequence modulate transcriptional output and noise.
Schöne Stefanie, Bothe Melissa, Einfeldt Edda, Borschiwer Marina, Benner Philipp, Vingron Martin, Thomas‑Chollier Morgane, Meijsing Sebastiaan H.
BioRxiv.

https://doi.org/10.1101/324996
Felix Marie‑Anne, Ailion Michael, Hsu Jung‑Chen, Richaud Aurelien, Wang John
BioRxiv.

Prediction of Mutations to Control Pathways Enabling Tumour Cell Invasion with the CoLoMoTo Interactive Notebook (Tutorial)
Levy Nicolas, Naldi Aurélien, Hernandez Céline, Stoll Gautier, Thieffry Denis, Zinovyev Andrei, Calzone Laurence, Paulevé Loï
BioRxiv.

DET1-mediated degradation of a SAGA-like deubiquitination module controls H2Bub homeostasis
Nassrallah Amr, Rougee Martin, Bourbousse Clara, Drevensek Stephanie, Fonseca Sandra, Iniesto Elisa, Ait‑Mohamed Ouardia, Deton‑Cabanillas Anne‑Flore, Zabulon Gerald, Ahmed Ikhlak, Stroebel David, Masson Vanessa, Lombard Berangere, Eeckhout Dominique, Gevaert Kris, Loew Damarys, Genovesio Auguste, Breyton Cecile, de Jaeger Geert, Bowler Chris, Rubio Vicente, Barneche Fredy
BioRxiv.

Changes in mRNA abundance drive differential shuttling of RNA binding proteins, linking cytoplasmic RNA degradation to transcription
Gilbertson Sarah, Federspiel Joel D, Hartenian Ella, Cristea Ileana M, Glaunsinger Britt
BioRxiv.

The CoLoMoTo Interactive Notebook : Accessible and Reproducible Computational Analyses for Qualitative Biological Networks
Naldi Aurélien, Hernandez Céline, Levy Nicolas, Stoll Gautier, Monteiro Pedro T, Chaouiya Claudine, Helikar Tomáš, Zinovyev Andrei, Calzone Laurence, Cohen‑Boulakia Sarah, Thieffry Denis, Paulevé Loïc
BioRxiv.

Logical modelling and analysis of cellular regulatory networks with GINsim 3.0
Naldi Aurélien, Hernandez Céline, Abou‑Jaoudé Wassim, Monteiro Pedro T., Chaouiya Claudine, Thieffry Denis
BioRxiv.

Enrichment of gene variants associated with treatable genetic disorders in psychiatric populations
Sriretnakumar Venuja, Harripaul Ricardo, Vincent John B., Kennedy James L., So Joyce
BioRxiv.

Transcription-dependent regulation of replication dynamics modulates genome stability
Blin Marion, Le Tallec Benoît, Nahese Viola, Schmidt Mélanie, Millot Gael A, Prioleau Marie‑Noëlle, Debatisse Michelle
BioRxiv.

Voltage- and Branch-specific Climbing Fiber Responses in Purkinje Cells
Zang Yunliang, Dieudonne Stephane, De Schutter Erik
BioRxiv.

Dual-layer transposon repression in heads of Drosophila melanogaster
van den Beek Marius, da Silva Bruno, Pouch Juliette, Ali Chaouche Mohammed el amine, Carré Clément, Antoniewski Christophe
BioRxiv.

Sequence-directed action of RSC remodeler and pioneer factors positions +1 nucleosome to facilitate transcription
Kubik Slawomir, O’Duibhir Eoghan, de Jonge Wim, Mattarocci Stefano, Albert Benjamin, Falcone Jean‑Luc, Bruzzone Maria J., Holstege Frank C.P., Shore David
BioRxiv.

DeepHINT : Understanding HIV-1 integration via deep learning with attention
Hu Hailin, Xiao An, Zhang Sai, Li Yangyang, Shi Xuanling, Jiang Tao, Zhang Linqi, Zhang Lei, Zeng Jianyang
BioRxiv.

Chromosome evolution at the origin of the ancestral vertebrate genome
Sacerdot Christine, Louis Alexandra, Bon Celine, ROEST CROLLIUS Hugues
BioRxiv.

Ribosome provisioning activates a bistable switch coupled to fast exit from stationary phase
Remigi Philippe, Ferguson Gayle C., De Monte Silvia, Rainey Paul B.
BioRxiv.

Universal temporal rate of DNA replication origin firing : A balance between origin activation and passivation
Arbona Jean‑Michel, Goldar Arach, Hyrien Olivier, Arneodo Alain, Audit Benjamin
BioRxiv.

High-throughput optical mapping of replicating DNA
De Carli Francesco, Menezes Nikita, Berrabah Wahiba, Barbe Valerie, Genovesio Auguste, Hyrien Olivier
BioRxiv.

Supergene evolution triggered by the introgression of a chromosomal inversion
Jay Paul, Whibley Annabel, Frezal Lise, de Cara Angeles, Nowell Reuben W., Mallet James, Dasmahapatra Kanchon K., Joron Mathieu
BioRxiv.

Characterizing the Liquid-liquid Phase Co-existence in Biomembrane : Insights from Local Non-affine Deformation and Topological Rearrangements
Iyer Sahithya S, Tripathy Madhusmita, Srivastava Anand
BioRxiv.

Ranked tree shapes, non-random extinctions and the loss of phylogenetic diversity
Maliet Odile, Gascuel Fanny, Lambert Amaury
BioRxiv.

Aquaporin-4 dependent glymphatic solute transport in rodent brain
Mestre Humberto, Kress Benjamin T., Zou Wenyan, Pu Tinglin, Murlidharan Giridhar, Castellanos Rivera Ruth M., Simon Matthew J., Pike Martin M., Plog Benjamin A., Xavier Anna L. R., Thrane Alexander S., Lundgaard Iben, Thomas John H., Xiao Ming, Asokan Aravind, Iliff Jeffrey J., Nedergaard Maiken
BioRxiv.

A bacterial GW-effector targets Arabidopsis AGO1 to promote pathogenicity and induces Effector-triggered immunity by disrupting AGO1 homeostasis
Thiebeauld Odon, Charvin Magali, Singla Rastogi Meenu, Yang Fan, Pontier Dominique, Pouzet Cecile, Bapaume Laure, Li Guangyong, Deslandes Laurent, Lagrange Thierry, Alfano James R., Navarro Lionel
BioRxiv.

Population adaptation in efficient balanced networks
Gutierrez Gabrielle J, Deneve Sophie
BioRxiv.

Redundancy principle for optimal random search in biology
Schuss Zeev, Basnayake Kanishka, Holcman David
BioRxiv.

Partial selfing eliminates inbreeding depression while maintaining genetic diversity
Chelo Ivo M., Afonso Bruno, Carvalho Sara, Theologidis Ioannis, Goy Christine, Pino‑Querido Ania, Proulx Stephen R., Teotonio Henrique
BioRxiv.

Dengue modeling in rural Cambodia : statistical performance versus epidemiological relevance
Champagne Clara, Paul Richard, Ly Sowath, Duong Veasna, Leang Rithea, Cazelles Bernard
BioRxiv.

Nucleosome rotational positioning is influenced by cis- and trans-acting factors
Wright Gregory M., Cui Feng
BioRxiv.

Transcriptional control and exploitation of an immune-responsive family of retrotransposons in Arabidopsis
Zervudacki Jérome, Yu Agnès, Amesefe Delase, Wang Jingyu, Drouaud Jan, Navarro Lionel, Deleris Angélique
BioRxiv.

Slower environmental change hinders adaptation from standing genetic variation
Guzella Thiago S., Dey Snigdhadip, Chelo Ivo M, Pino‑Querido Ania, Pereira Veronica F., Proulx Stephen R., Teotonio Henrique
BioRxiv.

An epigenetic mechanism for cavefish eye degeneration
Gore Aniket, Tomins Kelly, Iben James, Ma Li, Castranova Daniel, Davis Andrew, Parkhurst Amy, Jeffery William, Weinstein Brant
BioRxiv.

A simple and powerful analysis of lateral subdiffusion using single particle tracking
Renner Marianne, WANG Lili, LEVI Sabine, HENNEKINE Laetitia, TRILLER Antoine
BioRxiv.

miR-128-induced LINE-1 restriction is dependent on down-regulation of hnRNPA1
Pedersen Irene, Fung Lianna, Guzman Herlinda, Sevrioukov Evgueni, Idica Adam, Park Eddie, Bochnakien Aurore, Daugaard Iben, Jury Douglas, Mortazavi Ali, Zisoulis Dimitri
BioRxiv.

Interferon-inducible miR-128 modulates HIV-1 replication by targeting TNPO3 mRNA
Pedersen Irene, Bochnakiem Aurore, Zisoulis Dimitri, Idica Adam, Zhen Anjie, KewalRamani Vineet, Daugaard Iben, Hamdorf Matthias, Kitchen Scott, Lee KyeongEun
BioRxiv.

MicroRNA miR-128 represses LINE-1 (L1) retrotransposition by downregulating the nuclear import factor TNPO1
Idica Adam, Sevrioukov Evgueni, Zisoulis Dimitri, Hamdorf Matthias, Daugaard Iben, Kadandale Pavan, Pedersen Irene
BioRxiv.

miR-128 inhibits telomerase activity by targeting TERT mRNA
Guzman Herlinda, Sanders Katie, Idica Adam, Bochnakian Aurore, Jury Douglas, Daugaard Iben, Zisoulis Dimitri G., Pedersen Irene
BioRxiv.

Continuous rearrangement of the postsynaptic gephyrin scaffolding domain : a super-resolution quantified and energetic approach
Rodriguez Pamela C., Almeida Leandro G., Triller Antoine
BioRxiv.

Integrative analysis of large scale transcriptome data draws a comprehensive functional landscape of Phaeodactylum tricornutum genome and evolutionary origin of diatoms
Rastogi Achal, Maheswari Uma, Dorrell Richard G., Maumus Florian, Rocha Jimenez Vieira Fabio, Kustka Adam, McCarthy James, Allen Andy E., Kersey Paul, Bowler Chris, Tirichine Leila
BioRxiv.

Continuous gene flow contributes to low global species abundance and distribution of a marine model diatom
Rastogi Achal, Deton‑Cabanillas Anne‑Flore, Rocha Jimenez Vieira Fabio, Veluchamy Alaguraj, Cantrel Catherine, Wang Gaohong, Vanormelingen Pieter, Bowler Chris, Piganeau Gwenael, Tirichine Leila, Hu Hanhua
BioRxiv.

Non-cell autonomous Otx2 homeoprotein regulates visual cortex plasticity through Gadd45b/g
Apulei Jessica, Kim Namsuk, Testa Damien, Ribot Jérôme, Morizet David, Bernard Clémence, Jourdren Laurent, Blugeon Corinne, Di Nardo Ariel A., Prochiantz Alain
BioRxiv.

Detecting environment-dependent diversification from phylogenies : a simulation study and some empirical illustrations
Lewitus Eric, Morlon Helene
BioRxiv.

The mechanism of transcription start site selection
Yu Libing, Winkelman Jared, Pukhrambam Chirangini, Strick Terence, Nickels Bryce, Ebright Richard H.
BioRxiv.

Soil community assembly varies across body sizes in a tropical forest
Zinger Lucie, Taberlet Pierre, Schimann Heidy, Bonin Aurelie, Boyer Frederic, De Barba Marta, Gaucher Philippe, Gielly Ludovic, Giguet‑Covex Charline, Iribar Amaia, Rejou‑Mechain Maxime, Raye Gilles, Rioux Delphine, Schilling Vincent, Tymen Blaise, Viers Jerome, Zouiten Cyril, Thuiller Wilfried, Coissac Eric, Chave Jerome
BioRxiv.

Evolution of gene expression after whole-genome duplication : new insights from the spotted gar genome
Pasquier Jeremy, Braasch Ingo, Batzel Peter, Cabau Cedric, Montfort Jerome, Nguyen Thaovi, Jouanno Elodie, Berthelot Camille, Klopp Christophe, Journot Laurent, Postlethwait John, Guiguen Yann, Bobe Julien
BioRxiv.

Egr1 deficiency induces browning of inguinal subcutaneous white adipose tissue in mice
Milet Cecile, Bleher Marianne, Allbright Kassandra, Orgeur Mickael, Coulpier Fanny, Duprez Delphine, Havis Emmanuelle
BioRxiv.

Cyclin G And The Polycomb Repressive Complexes PRC1 And PR-DUB Cooperate For Developmental Stability
Dardalhon‑Cumenal Delphine, Deraze Jerome, Dupont Camille A., Ribeiro Valerie, Coleno‑Costes Anne, Pouch Juliette, Le Crom Stephane, Thomassin‑Bourrel Helene, Debat Vincent, Randsholt Neel B., Peronnet Frederique
BioRxiv.

Transcription Factors Orchestrate Dynamic Interplay Between Genome Topology And Gene Regulation During Cell Reprogramming
Stadhouders Ralph, Vidal Enrique, Serra François, Stefano Bruno Di, Dily François Le, Quilez Javier, Gomez Antonio, Collombet Samuel, Berenguer Clara, Cuartero Yasmina, Hecht Jochen, Filion Guillaume, Beato Miguel, Marti‑Renom Marc A., Graf Thomas
BioRxiv.

Cerebellar Re-Encoding Of Self-Generated Head Movements
Dugue Guillaume Pierre, Tihy Matthieu, Gourevitch Boris, Lena Clement
BioRxiv.

The fitness cost of mis-splicing is the main determinant of alternative splicing patterns
Saudemont Baptiste, Popa Alexandra, Parmley Joanna L., Rocher Vincent, Blugeon Corinne, Necsulea Anamaria, Meyer Eric, Duret Laurent
BioRxiv.

A computational toolbox and step-by-step tutorial for the analysis of neuronal population dynamics in calcium imaging data
Romano Sebastián A., Pérez‑Schuster Verónica, Jouary Adrien, Candeo Alessia, Boulanger‑Weill Jonathan, Sumbre Germán
BioRxiv.

Initiation of DNA replication requires actin dynamics and formin activity
Parisis Nikolaos, Krasinska Liliana, Harker Bethany, Urbach Serge, Rossignol Michel, Camasses Alain, Dewar James, Morin Nathalie, Fisher Daniel
BioRxiv.

Evolutionary forces affecting synonymous variations in plant genomes
Clément Yves, Sarah Gautier, Holtz Yan, Homa Felix, Pointet Stéphanie, Contreras Sandy, Nabholz Benoit, Sabot François, Sauné Laure, Ardisson Morgane, Bacilieri Roberto, Besnard Guillaume, Berger Angélique, Cardi Céline, De Bellis Fabien, Fouet Olivier, Jourda Cyril, Khadari Bouchaib, Lanaud Claire, Leroy Thierry, Pot David, Sauvage Christopher, Sarcelli Nora, Tregear James, Vigouroux Yves, Yahiaoui Nabila, Ruiz Manuel, Santoni Sylvain, Labouisse Jean‑Pierre, Pham Jean‑Louis, David Jacques, Glémin Sylvain
BioRxiv.

The genealogical decomposition of a matrix population model with applications to the aggregation of stages
Bienvenu François, Akcay Erol, Legendre Stéphane, McCandlish David
BioRxiv.

RSAT matrix-clustering : dynamic exploration and redundancy reduction of transcription factor binding motif collections
Castro‑Mondragon Jaime, Jaeger Sebastien, Thieffry Denis, Thomas‑Chollier Morgane, van Helden Jacques
BioRxiv.

Crowding-induced transcriptional bursts dictate nucleosome and polymerase density profiles along genes
van den Berg Aafke A, Depken Martin
BioRxiv.

Structure in the variability of the basic reproductive number (R
Champagne Clara, Salthouse David G, Paul Richard, Cao‑Lormeau Van‑Mai, Roche Benjamin, Cazelles Bernard
BioRxiv.

Ecogenomics and biogeochemical impacts of uncultivated globally abundant ocean viruses
Roux Simon, Brum Jennifer R, Dutilh Bas E., Sunagawa Shinichi, Duhaime Melissa B, Loy Alexander, Poulos Bonnie T, Solonenko Natalie, Lara Elena, Poulain Julie, PESANT Stephane, Kandels‑Lewis Stefanie, Dimier Céline, Picheral Marc, Searson Sarah, Cruaud Corinne, Alberti Adriana, Duarte Carlos M. M, Gasol Josep M M, Vaqué Dolors, Bork Peer, Acinas Silvia G, Wincker Patrick, Sullivan Matthew B
BioRxiv.

Automatic classification of behavior in zebrafish larvae
Jouary Adrien, Sumbre German
BioRxiv.

On the evolutionary origins of equity
Debove Stephane, Baumard Nicolas, Andre Jean‑Baptiste
BioRxiv.

How human behavior drives the propagation of an emerging infection : the case of the 2014 Chikungunya outbreak in Martinique
Roche Benjamin, Gaillard Beatrice, Leger Lucas, Moutenda Renelise, Sochaki Thomas, Cazelles Bernard, Ledrans Martine, Blateau Alain, Fontenille Didier, Etienne Manuel, Simard Frederic, Salathe Marcel, Yebakima Andre
BioRxiv.

Discovery of a Natural Microsporidian Pathogen with a Broad Tissue Tropism in
Luallen Robert J, Reinke Aaron W, Tong Linda, Botts Michael R, Felix Marie‑Anne, Troemel Emily R
BioRxiv.

Chromatin mobility after DNA damage is modified to enhance long distance explorations and minimize local resampling
Mine‑Hattab Judith, Recamier Vincent, Izeddin Ignacio, Rothstein Rodney, Darzacq Xavier
BioRxiv.

Characterizing and comparing phylogenies from their Laplacian spectrum
Lewitus Eric, Morlon Helene
BioRxiv.

Estimating the effect of competition on trait evolution using maximum likelihood inference
Drury Jonathan, Clavel Julien, Manceau Marc, Morlon Hélène
BioRxiv.

Cooperative development of logical modelling standards and tools with CoLoMoTo
Naldi Aurélien, Monteiro Pedro T, Müssel Christoph, Kestler Hans A, Thieffry Denis, Xenarios Ioannis, Saez‑Rodriguez Julio, Helikar Tomas, Chaouiya Claudine
BioRxiv.

Analysis of the study of the cerebellar pinceau by Korn and Axelrad
Blot Antonin, Barbour Boris
BioRxiv.