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Publications

2023

Plastic responses lead to increased neurotoxin production in the diatom Pseudo-nitzschia under ocean warming and acidification.
Xu D, Zheng G, Brennan G, Wang Z, Jiang T, Sun K, Fan X, Bowler C, Zhang X, Zhang Y, Wang W, Wang Y, Li Y, Wu H, Li Y, Fu FX, Hutchins DA, Tan Z, Ye N
ISME J. 2023 Jan 20.

Genome-wide measurement of DNA replication fork directionality and quantification of DNA replication initiation and termination with Okazaki fragment sequencing.
Wu X, Liu Y, d’Aubenton‑Carafa Y, Thermes C, Hyrien O, Chen CL, Petryk N
Nat Protoc. 2023 Jan 18.

Data-driven multiscale dynamical framework to control a pandemic evolution with non-pharmaceutical interventions.
Reingruber J, Papale A, Ruckly S, Timsit JF, Holcman D
PLoS One. 2023. 18(1):e0278882.

Reconstruction of hundreds of reference ancestral genomes across the eukaryotic kingdom.
Muffato M, Louis A, Nguyen NTT, Lucas J, Berthelot C, Roest Crollius H
Nat Ecol Evol. 2023 Jan 16.

Annexin A1 is a polarity cue that directs mitotic spindle orientation during mammalian epithelial morphogenesis.
Fankhaenel M, Hashemi FSG, Mourao L, Lucas E, Hosawi MM, Skipp P, Morin X, Scheele CLGJ, Elias S
Nat Commun. 2023 Jan 11. 14(1):151.

Exclusion of m6A from splice-site proximal regions by the exon junction complex dictates m6A topologies and mRNA stability.
Uzonyi A, Dierks D, Nir R, Kwon OS, Toth U, Barbosa I, Burel C, Brandis A, Rossmanith W, Le Hir H, Slobodin B, Schwartz S
Mol Cell. 2023 Jan 19. 83(2):237-251.e7.

Convergent evolution and horizontal gene transfer in Arctic Ocean microalgae.
Dorrell RG, Kuo A, Füssy Z, Richardson EH, Salamov A, Zarevski N, Freyria NJ, Ibarbalz FM, Jenkins J, Pierella Karlusich JJ, Stecca Steindorff A, Edgar RE, Handley L, Lail K, Lipzen A, Lombard V, McFarlane J, Nef C, Novák Vanclová AM, Peng Y, Plott C, Potvin M, Vieira FRJ, Barry K, de Vargas C, Henrissat B, Pelletier E, Schmutz J, Wincker P, Dacks JB, Bowler C, Grigoriev IV, Lovejoy C
Life Sci Alliance. 2023 Mar. 6(3).

Microglial TNFα orchestrates protein phosphorylation in the cortex during the sleep period and controls homeostatic sleep.
Pinto MJ, Cottin L, Dingli F, Laigle V, Ribeiro LF, Triller A, Henderson F, Loew D, Fabre V, Bessis A
EMBO J. 2023 Jan 4. 42(1):e111485.

Quantifying postsynaptic receptor dynamics : insights into synaptic function.
Maynard SA, Ranft J, Triller A
Nat Rev Neurosci. 2023 Jan. 24(1):4-22.

KCa1.1 channels contribute to optogenetically driven post-stimulation silencing in cerebellar molecular layer interneurons.
Kassa M, Bradley J, Jalil A, Llano I
J Gen Physiol. 2023 Jan 2. 155(1).

A robust approach to estimate relative phytoplankton cell abundances from metagenomes.
Pierella Karlusich JJ, Pelletier E, Zinger L, Lombard F, Zingone A, Colin S, Gasol JM, Dorrell RG, Henry N, Scalco E, Acinas SG, Wincker P, de Vargas C, Bowler C
Mol Ecol Resour. 2023 Jan. 23(1):16-40.